Protein ZmALF11
ZmALF11 is a protein in the Alfin-like family.
Information
TF Name: ZmALF11
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF11
Uniprot ID: K7V3F9
Subgenome: 2

Protein ZmALF11

ZmALF11 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb349140_T003
Zm00001eb349140_T001
Zm00001eb349140_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d010241DAPseq no logo sequence fimo position
Zm00001d010241DAPseq no logo sequence fimo position
Zm00001d010241ChIPseq no logo sequence fimo position
Zm00001d010241PChIPseq no logo sequence fimo position

Interactions where ZmALF11 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF11 is the target  
Expand


There are 38 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb349140_T003 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
Alfin-like
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTCCTTGGTCTGCGGCCCTTTGT...

GRMZM2G158918_T01 from maize genome v3


Related TFome: pUT6296

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

Nucleotide Sequence
Copy to clipboard
     
Expand

AAAATAAAACCTCACCCCTCCTTGG...

Zm00001d010241_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEAR

Nucleotide Sequence
Copy to clipboard
     
Expand

AACCTCACCCCTCCTTGGTCTGCGG...

Zm00001d010241_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TS

Nucleotide Sequence
Copy to clipboard
     
Expand

TGTCCTGTCTCCTCCCACCCTTGCC...

Zm00001d010241_T003 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MFSIMIPFSIFITDDFLFQTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWY
HGKCVKITPARAEHIKHYKCPDCNNKRARA

Nucleotide Sequence
Copy to clipboard
     
Expand

GATCATGAGCCTAAATTTAATCCAT...

Zm00001eb349140_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

Nucleotide Sequence
Copy to clipboard
     
Expand

CAAAATCTCCCCGGAAATGACCACA...

Zm00001eb349140_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDPGAGAHYSVRTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGI
NFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGVANKQNKEKGPNSTSKSNK
TSSKMTSRPESHSKATKVAVPPKDDDDESGEEYEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCNNKRARA

Nucleotide Sequence
Copy to clipboard
     
Expand

CAAAATCTCCCCGGAAATGACCACA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26